STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004632annotation not available (89 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.944
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.848
ENSCAPP00000000802
annotation not available
    
 0.828
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.828
IL10
Interleukin 10.
    
 0.824
ENSCAPP00000009742
annotation not available
   
 0.818
IFNLR1
Interferon lambda receptor 1.
   
 0.814
IL22RA1
Interleukin 22 receptor subunit alpha 1.
    
 0.812
TP73
Tumor protein p73.
    
 0.784
ENSCAPP00000012218
annotation not available
    
 
 0.779
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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