Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A13Solute carrier family 25 member 13. (413 aa)    
Predicted Functional Partners:
SLC25A12
Solute carrier family 25 member 12.
   
  0.997
MICU2
Mitochondrial calcium uptake 2.
     
 0.912
PCCA
propionyl-CoA carboxylase subunit alpha.
   
 
 0.846
MICU1
Mitochondrial calcium uptake 1.
     
 0.843
COX6C
Cytochrome c oxidase subunit 6C.
    
   0.842
ASS1
Argininosuccinate synthase 1.
      
 0.820
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
      
 0.811
AGO2
Argonaute RISC catalytic component 2.
    
   0.785
CCNF
Cyclin F.
    
   0.785
MCU
Mitochondrial calcium uniporter.
     
 0.783
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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