Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004637annotation not available (295 aa)    
Predicted Functional Partners:
SMURF1
SMAD specific E3 ubiquitin protein ligase 1.
 
  
  0.900
DVL1
Dishevelled segment polarity protein 1.
    
 0.866
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
 
  
  0.824
ITCH
Itchy E3 ubiquitin protein ligase.
 
  
  0.816
ENSCAPP00000008686
annotation not available
    
 0.810
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
 
  
  0.810
TRAF6
TNF receptor associated factor 6.
    
 0.783
GJA1
Gap junction protein alpha 1.
    
  0.778
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
  0.760
AMOTL1
Angiomotin like 1.
    
 0.745
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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