STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004637annotation not available (295 aa)    
Predicted Functional Partners:
ENSCAPP00000008686
annotation not available
    
 0.815
SMAD4
SMAD family member 4.
   
 0.780
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 0.779
DVL1
Dishevelled segment polarity protein 1.
    
 0.764
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.760
ENSCAPP00000010366
annotation not available
    
 0.760
ISG15
ISG15 ubiquitin like modifier.
    
 0.757
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
 
  
 0.752
ENSCAPP00000016912
annotation not available
    
 0.752
ENSCAPP00000000492
annotation not available
    
 0.739
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.