Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM144Transmembrane protein 144. (235 aa)    
Predicted Functional Partners:
TMEM192
Transmembrane protein 192.
      
 0.619
NSG2
Neuronal vesicle trafficking associated 2.
      
 0.609
TMEM19
Transmembrane protein 19.
      
 0.572
SLC39A2
Solute carrier family 39 member 2.
      
 0.569
SLC35C1
Solute carrier family 35 member C1.
      
 0.569
SLC35B3
Solute carrier family 35 member B3.
      
 0.569
SLC5A11
Solute carrier family 5 member 11.
      
 0.452
NIPAL1
NIPA like domain containing 1.
      
 0.450
ENSCAPP00000009964
annotation not available
      
 0.447
ENSCAPP00000014271
annotation not available
      
 0.446
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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