BCAT2 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

BCAT2

Branched chain amino acid transaminase 2. (338 aa)

Predicted Functional Partners:

BCKDHB

0.976

ENSCAPP00000010045

0.961

SDSL

0.960

ENSCAPP00000011618

0.960

CTH

0.939

AGXT2

0.933

ENSCAPP00000001229

0.924

ENSCAPP00000010425

0.924

LDHA

0.924

ENSCAPP00000015393

0.923

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGXT2	BCAT2	ENSCAPP00000000131	ENSCAPP00000004643	Alanine--glyoxylate aminotransferase 2.	Branched chain amino acid transaminase 2.	0.933
AGXT2	BCKDHB	ENSCAPP00000000131	ENSCAPP00000017679	Alanine--glyoxylate aminotransferase 2.	Branched chain keto acid dehydrogenase E1 subunit beta.	0.935
AGXT2	CTH	ENSCAPP00000000131	ENSCAPP00000010508	Alanine--glyoxylate aminotransferase 2.	Cystathionine gamma-lyase.	0.930
AGXT2	ENSCAPP00000001229	ENSCAPP00000000131	ENSCAPP00000001229	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.913
AGXT2	ENSCAPP00000010045	ENSCAPP00000000131	ENSCAPP00000010045	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.920
AGXT2	ENSCAPP00000010425	ENSCAPP00000000131	ENSCAPP00000010425	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.913
AGXT2	ENSCAPP00000011618	ENSCAPP00000000131	ENSCAPP00000011618	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.933
AGXT2	ENSCAPP00000015393	ENSCAPP00000000131	ENSCAPP00000015393	Alanine--glyoxylate aminotransferase 2.	annotation not available	0.915
AGXT2	LDHA	ENSCAPP00000000131	ENSCAPP00000018479	Alanine--glyoxylate aminotransferase 2.	Lactate dehydrogenase A.	0.913
AGXT2	SDSL	ENSCAPP00000000131	ENSCAPP00000002959	Alanine--glyoxylate aminotransferase 2.	Serine dehydratase like.	0.933
BCAT2	AGXT2	ENSCAPP00000004643	ENSCAPP00000000131	Branched chain amino acid transaminase 2.	Alanine--glyoxylate aminotransferase 2.	0.933
BCAT2	BCKDHB	ENSCAPP00000004643	ENSCAPP00000017679	Branched chain amino acid transaminase 2.	Branched chain keto acid dehydrogenase E1 subunit beta.	0.976
BCAT2	CTH	ENSCAPP00000004643	ENSCAPP00000010508	Branched chain amino acid transaminase 2.	Cystathionine gamma-lyase.	0.939
BCAT2	ENSCAPP00000001229	ENSCAPP00000004643	ENSCAPP00000001229	Branched chain amino acid transaminase 2.	annotation not available	0.924
BCAT2	ENSCAPP00000010045	ENSCAPP00000004643	ENSCAPP00000010045	Branched chain amino acid transaminase 2.	annotation not available	0.961
BCAT2	ENSCAPP00000010425	ENSCAPP00000004643	ENSCAPP00000010425	Branched chain amino acid transaminase 2.	annotation not available	0.924
BCAT2	ENSCAPP00000011618	ENSCAPP00000004643	ENSCAPP00000011618	Branched chain amino acid transaminase 2.	annotation not available	0.960
BCAT2	ENSCAPP00000015393	ENSCAPP00000004643	ENSCAPP00000015393	Branched chain amino acid transaminase 2.	annotation not available	0.923
BCAT2	LDHA	ENSCAPP00000004643	ENSCAPP00000018479	Branched chain amino acid transaminase 2.	Lactate dehydrogenase A.	0.924
BCAT2	SDSL	ENSCAPP00000004643	ENSCAPP00000002959	Branched chain amino acid transaminase 2.	Serine dehydratase like.	0.960