Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRG3Proline rich and Gla domain 3. (239 aa)    
Predicted Functional Partners:
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
   0.885
ENSCAPP00000011344
annotation not available
    
   0.856
GLIPR2
GLI pathogenesis related 2.
      
 0.443
RNASE10
Ribonuclease A family member 10 (inactive).
      
 0.435
ENSCAPP00000006738
annotation not available
      
 0.410
ENSCAPP00000011492
annotation not available
      
 0.410
B4GALT4
Beta-1,4-galactosyltransferase 4.
      
 0.410
TCF23
Transcription factor 23.
      
 0.410
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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