Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM53BFamily with sequence similarity 53 member B. (415 aa)    
Predicted Functional Partners:
SFN
Stratifin.
    
 
 0.841
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
 
 0.823
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
      
 0.801
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.768
CYFIP2
Cytoplasmic FMR1 interacting protein 2.
      
 0.746
ENSCAPP00000009903
annotation not available
    
 
 0.686
ENSCAPP00000017737
annotation not available
    
 
 0.686
DYRK1B
Dual specificity tyrosine phosphorylation regulated kinase 1B.
    
 
 0.661
GLO1
Glyoxalase I.
      
 0.575
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta.
    
 
 0.534
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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