STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT19Keratin 19. (260 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
DAG1
Dystroglycan 1.
     
 0.766
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.722
RANBP2
RAN binding protein 2.
    
 0.721
ENSCAPP00000006698
annotation not available
    
 0.717
KDM6B
Lysine demethylase 6B.
    
 0.704
ENSCAPP00000000778
annotation not available
   
0.698
ENSCAPP00000000818
annotation not available
   
0.698
ENSCAPP00000005141
annotation not available
   
0.698
ENSCAPP00000014719
annotation not available
   
0.698
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.