STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004666annotation not available (590 aa)    
Predicted Functional Partners:
ENSCAPP00000015921
annotation not available
    
 0.892
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.891
CXXC1
CXXC finger protein 1.
    
 0.848
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
CFAP45
Cilia and flagella associated protein 45.
   
 
 0.813
TEKT1
Tektin 1.
   
 
 0.811
ENSCAPP00000000406
annotation not available
   
 
 0.800
WDR82
WD repeat domain 82.
    
 0.793
ENSCAPP00000003830
annotation not available
    
 0.792
ENSCAPP00000012373
annotation not available
    
 0.792
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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