Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004666annotation not available (590 aa)    
Predicted Functional Partners:
EFHC1
EF-hand domain containing 1.
   
 
 0.983
ENSCAPP00000006888
annotation not available
   
 
 0.964
TEKT1
Tektin 1.
   
 
 0.959
ENSCAPP00000011657
annotation not available
   
 
 0.946
DNAI1
Dynein axonemal intermediate chain 1.
   
 0.943
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 0.939
RIBC2
RIB43A domain with coiled-coils 2.
   
 0.936
PACRG
Parkin coregulated.
   
 
 0.936
CFAP20
Cilia and flagella associated protein 20.
    
 0.934
EFCAB6
EF-hand calcium binding domain 6.
   
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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