ENSCAPP00000004667 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

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[Homology]

Score

ENSCAPP00000004667

annotation not available (221 aa)

Predicted Functional Partners:

ENSCAPP00000000375

0.999

EDN1

0.999

GNAI3

0.984

EDN2

0.971

ENSCAPP00000011373

0.964

AGT

0.948

KNG1

0.934

GNA12

0.925

ADRA1B

0.925

GNA13

0.924

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRA1B	EDN1	ENSCAPP00000015647	ENSCAPP00000016242	Adrenoceptor alpha 1B.	Endothelin 1.	0.909
ADRA1B	EDN2	ENSCAPP00000015647	ENSCAPP00000006316	Adrenoceptor alpha 1B.	Endothelin 2.	0.719
ADRA1B	ENSCAPP00000000375	ENSCAPP00000015647	ENSCAPP00000000375	Adrenoceptor alpha 1B.	annotation not available	0.899
ADRA1B	ENSCAPP00000004667	ENSCAPP00000015647	ENSCAPP00000004667	Adrenoceptor alpha 1B.	annotation not available	0.925
ADRA1B	ENSCAPP00000011373	ENSCAPP00000015647	ENSCAPP00000011373	Adrenoceptor alpha 1B.	annotation not available	0.582
ADRA1B	GNA12	ENSCAPP00000015647	ENSCAPP00000010435	Adrenoceptor alpha 1B.	G protein subunit alpha 12.	0.944
ADRA1B	GNA13	ENSCAPP00000015647	ENSCAPP00000008291	Adrenoceptor alpha 1B.	G protein subunit alpha 13.	0.945
ADRA1B	GNAI3	ENSCAPP00000015647	ENSCAPP00000004447	Adrenoceptor alpha 1B.	G protein subunit alpha i3.	0.582
AGT	EDN1	ENSCAPP00000008025	ENSCAPP00000016242	Angiotensinogen.	Endothelin 1.	0.842
AGT	ENSCAPP00000000375	ENSCAPP00000008025	ENSCAPP00000000375	Angiotensinogen.	annotation not available	0.491
AGT	ENSCAPP00000004667	ENSCAPP00000008025	ENSCAPP00000004667	Angiotensinogen.	annotation not available	0.948
AGT	ENSCAPP00000011373	ENSCAPP00000008025	ENSCAPP00000011373	Angiotensinogen.	annotation not available	0.426
AGT	GNAI3	ENSCAPP00000008025	ENSCAPP00000004447	Angiotensinogen.	G protein subunit alpha i3.	0.420
AGT	KNG1	ENSCAPP00000008025	ENSCAPP00000001194	Angiotensinogen.	Kininogen 1.	0.918
EDN1	ADRA1B	ENSCAPP00000016242	ENSCAPP00000015647	Endothelin 1.	Adrenoceptor alpha 1B.	0.909
EDN1	AGT	ENSCAPP00000016242	ENSCAPP00000008025	Endothelin 1.	Angiotensinogen.	0.842
EDN1	EDN2	ENSCAPP00000016242	ENSCAPP00000006316	Endothelin 1.	Endothelin 2.	0.919
EDN1	ENSCAPP00000000375	ENSCAPP00000016242	ENSCAPP00000000375	Endothelin 1.	annotation not available	0.913
EDN1	ENSCAPP00000004667	ENSCAPP00000016242	ENSCAPP00000004667	Endothelin 1.	annotation not available	0.999
EDN1	ENSCAPP00000011373	ENSCAPP00000016242	ENSCAPP00000011373	Endothelin 1.	annotation not available	0.442