Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004668annotation not available (790 aa)    
Predicted Functional Partners:
ENSCAPP00000003819
annotation not available
 
 
 
  0.967
ENSCAPP00000014571
annotation not available
   
 
 0.939
ZC3H3
Zinc finger CCCH-type containing 3.
   
 
 0.935
YTHDC2
YTH domain containing 2.
   
 0.926
YTHDC1
YTH domain containing 1.
   
 
 0.925
ENSCAPP00000017563
annotation not available
   
 0.917
ENSCAPP00000007557
annotation not available
    
 0.875
MTREX
Mtr4 exosome RNA helicase.
   
 0.850
TAGLN
Transgelin.
    
   0.825
SCAF4
SR-related CTD associated factor 4.
   
 
 0.823
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.