STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH6Cadherin 6. (608 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.832
JUP
Junction plakoglobin.
    
 0.806
CDH20
Cadherin 20.
  
  
0.745
CDH18
Cadherin 18.
   
0.745
CDH12
Cadherin 12.
     
0.712
CTNNA1
Catenin alpha 1.
    
 0.711
CTNNA2
Catenin alpha 2.
    
 0.711
ENSCAPP00000010223
annotation not available
     
0.702
CDH17
Cadherin 17.
     
0.685
ENSCAPP00000012377
annotation not available
   
 
 
0.674
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.