ENSCAPP00000004672 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000004672

annotation not available (111 aa)

Predicted Functional Partners:

ENSCAPP00000002903

0.999

ENSCAPP00000009470

0.998

ENSCAPP00000013166

0.998

MCM3

0.998

MCM6

0.997

MCM2

0.994

MCM9

0.993

ENSCAPP00000010914

0.990

ENSCAPP00000004478

0.940

ENSCAPP00000015690

0.940

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000002903	ENSCAPP00000004478	ENSCAPP00000002903	ENSCAPP00000004478	annotation not available	annotation not available	0.985
ENSCAPP00000002903	ENSCAPP00000004672	ENSCAPP00000002903	ENSCAPP00000004672	annotation not available	annotation not available	0.999
ENSCAPP00000002903	ENSCAPP00000009470	ENSCAPP00000002903	ENSCAPP00000009470	annotation not available	annotation not available	0.999
ENSCAPP00000002903	ENSCAPP00000010914	ENSCAPP00000002903	ENSCAPP00000010914	annotation not available	annotation not available	0.997
ENSCAPP00000002903	ENSCAPP00000013166	ENSCAPP00000002903	ENSCAPP00000013166	annotation not available	annotation not available	0.999
ENSCAPP00000002903	ENSCAPP00000015690	ENSCAPP00000002903	ENSCAPP00000015690	annotation not available	annotation not available	0.985
ENSCAPP00000002903	MCM2	ENSCAPP00000002903	ENSCAPP00000003876	annotation not available	Minichromosome maintenance complex component 2.	0.999
ENSCAPP00000002903	MCM3	ENSCAPP00000002903	ENSCAPP00000013580	annotation not available	Minichromosome maintenance complex component 3.	0.999
ENSCAPP00000002903	MCM6	ENSCAPP00000002903	ENSCAPP00000000980	annotation not available	Minichromosome maintenance complex component 6.	0.999
ENSCAPP00000002903	MCM9	ENSCAPP00000002903	ENSCAPP00000016798	annotation not available	Minichromosome maintenance 9 homologous recombination repair factor.	0.999
ENSCAPP00000004478	ENSCAPP00000002903	ENSCAPP00000004478	ENSCAPP00000002903	annotation not available	annotation not available	0.985
ENSCAPP00000004478	ENSCAPP00000004672	ENSCAPP00000004478	ENSCAPP00000004672	annotation not available	annotation not available	0.940
ENSCAPP00000004478	ENSCAPP00000009470	ENSCAPP00000004478	ENSCAPP00000009470	annotation not available	annotation not available	0.984
ENSCAPP00000004478	ENSCAPP00000013166	ENSCAPP00000004478	ENSCAPP00000013166	annotation not available	annotation not available	0.985
ENSCAPP00000004478	MCM2	ENSCAPP00000004478	ENSCAPP00000003876	annotation not available	Minichromosome maintenance complex component 2.	0.955
ENSCAPP00000004478	MCM3	ENSCAPP00000004478	ENSCAPP00000013580	annotation not available	Minichromosome maintenance complex component 3.	0.985
ENSCAPP00000004478	MCM9	ENSCAPP00000004478	ENSCAPP00000016798	annotation not available	Minichromosome maintenance 9 homologous recombination repair factor.	0.955
ENSCAPP00000004672	ENSCAPP00000002903	ENSCAPP00000004672	ENSCAPP00000002903	annotation not available	annotation not available	0.999
ENSCAPP00000004672	ENSCAPP00000004478	ENSCAPP00000004672	ENSCAPP00000004478	annotation not available	annotation not available	0.940
ENSCAPP00000004672	ENSCAPP00000009470	ENSCAPP00000004672	ENSCAPP00000009470	annotation not available	annotation not available	0.998