STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35A4Solute carrier family 35 member A4. (324 aa)    
Predicted Functional Partners:
PEPD
Peptidase D.
    
 0.486
XPNPEP2
X-prolyl aminopeptidase 2.
    
 0.486
FASTKD3
FAST kinase domains 3.
    
 0.486
XPNPEP1
X-prolyl aminopeptidase 1.
    
 0.486
XPNPEP3
X-prolyl aminopeptidase 3.
    
 0.486
GSS
Glutathione synthetase.
   
 
  0.472
MAN1A2
Mannosidase alpha class 1A member 2.
      
 0.430
SPPL3
Signal peptide peptidase like 3.
      
 0.424
SLC35C1
Solute carrier family 35 member C1.
   
  
 0.417
SLC35B1
Solute carrier family 35 member B1.
   
  
 0.409
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.