STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB39Zinc finger and BTB domain containing 39. (636 aa)    
Predicted Functional Partners:
RNF166
Ring finger protein 166.
    
 0.608
TARBP2
TARBP2 subunit of RISC loading complex.
    
 0.584
CSRNP2
Cysteine and serine rich nuclear protein 2.
   
  
 0.571
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.562
KDM6B
Lysine demethylase 6B.
    
 0.552
ESYT1
Extended synaptotagmin 1.
      
 0.549
ENSCAPP00000013045
annotation not available
    
  0.544
BARD1
BRCA1 associated RING domain 1.
    
 0.542
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.539
MRPS6
Mitochondrial ribosomal protein S6.
    
  0.536
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.