Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004692annotation not available (362 aa)    
Predicted Functional Partners:
RIOK2
RIO kinase 2.
   
 0.999
RIOK1
RIO kinase 1.
   
 0.999
NOP14
NOP14 nucleolar protein.
   
 0.999
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.999
BYSL
Bystin like.
   
 0.999
RIOK3
RIO kinase 3.
   
 0.997
KRR1
KRR1 small subunit processome component homolog.
   
 0.996
NOC4L
Nucleolar complex associated 4 homolog.
   
 
 0.994
ENSCAPP00000016878
annotation not available
   
 0.994
RRP12
Ribosomal RNA processing 12 homolog.
   
 0.992
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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