STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85ACoiled-coil domain containing 85A. (457 aa)    
Predicted Functional Partners:
ENSCAPP00000006441
annotation not available
    
 
 0.629
ENSCAPP00000012254
annotation not available
      
 0.568
ATP9B
ATPase phospholipid transporting 9B (putative).
      
 0.564
SGCZ
Sarcoglycan zeta.
      
 0.564
ARHGAP21
Rho GTPase activating protein 21.
    
 
 0.533
CARD19
Caspase recruitment domain family member 19.
      
 0.438
ENSCAPP00000006890
annotation not available
      
0.422
ENSCAPP00000017181
annotation not available
   
 
  0.416
IL10RB
Interleukin 10 receptor subunit beta.
   
 
 0.411
TP53BP2
Tumor protein p53 binding protein 2.
   
 
 0.411
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.