STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85ACoiled-coil domain containing 85A. (457 aa)    
Predicted Functional Partners:
ENSCAPP00000006441
annotation not available
    
 
 0.699
ARHGAP21
Rho GTPase activating protein 21.
    
 
 0.678
IL10RB
Interleukin 10 receptor subunit beta.
   
 
 0.595
TP53BP2
Tumor protein p53 binding protein 2.
   
 
 0.595
CARD19
Caspase recruitment domain family member 19.
      
 0.571
ENSCAPP00000006495
annotation not available
      
 0.570
LY6H
Lymphocyte antigen 6 family member H.
      
 0.569
DTD2
D-aminoacyl-tRNA deacylase 2.
      
 0.568
BUD13
BUD13 homolog.
      
 0.568
ENSCAPP00000006890
annotation not available
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.