STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004704annotation not available (92 aa)    
Predicted Functional Partners:
RBFOX2
RNA binding fox-1 homolog 2.
   
 
 0.736
RBFOX1
RNA binding fox-1 homolog 1.
   
 
 0.646
ESRP1
Epithelial splicing regulatory protein 1.
    
 
 0.641
ENSCAPP00000005553
annotation not available
    
 
 0.594
ENSCAPP00000014093
annotation not available
    
 
 0.594
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
    
 
 0.594
CALB2
Calbindin 2.
      
 0.564
RCVRN
Recoverin.
      
 0.564
OPN4
Opsin 4.
      
 0.564
ESRP2
Epithelial splicing regulatory protein 2.
    
 
 0.560
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.