Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004704annotation not available (92 aa)    
Predicted Functional Partners:
RBFOX2
RNA binding fox-1 homolog 2.
   
 
 0.982
ESRP1
Epithelial splicing regulatory protein 1.
    
 
 0.964
RBFOX1
RNA binding fox-1 homolog 1.
   
 
 0.918
PITX1
Paired like homeodomain 1.
    
   0.884
ESRP2
Epithelial splicing regulatory protein 2.
    
 
 0.881
TBCK
TBC1 domain containing kinase.
    
   0.837
ENSCAPP00000018074
annotation not available
    
   0.814
RDH12
Retinol dehydrogenase 12.
    
   0.793
ENSCAPP00000002918
annotation not available
    
   0.709
DIP2C
Disco interacting protein 2 homolog C.
     
 0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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