STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FADS1Fatty acid desaturase 1. (429 aa)    
Predicted Functional Partners:
ELOVL2
ELOVL fatty acid elongase 2.
     
 0.930
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
    
 0.916
HACD2
3-hydroxyacyl-CoA dehydratase 2.
     
 0.911
HACD4
3-hydroxyacyl-CoA dehydratase 4.
     
 0.910
HACD3
3-hydroxyacyl-CoA dehydratase 3.
     
 0.910
ELOVL5
ELOVL fatty acid elongase 5.
   
 
 0.853
PLA2G4A
Phospholipase A2 group IVA.
     
 0.846
TECR
trans-2,3-enoyl-CoA reductase.
     
 0.829
FDX1
Ferredoxin 1.
  
 
 0.804
SC5D
sterol-C5-desaturase.
  
 
 0.752
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.