STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN3Actinin alpha 3 (gene/pseudogene). (837 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
  
0.934
VCL
Vinculin.
   
 0.883
TNNT3
Troponin T3, fast skeletal type.
   
 0.878
TNNI2
Troponin I2, fast skeletal type.
   
 0.871
ENSCAPP00000008920
annotation not available
    
 0.857
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.836
TNNC2
Troponin C2, fast skeletal type.
   
 0.830
MYL1
Myosin light chain 1.
   
 0.817
MYBPC1
Myosin binding protein C, slow type.
   
 0.764
MYBPC2
Myosin binding protein C, fast type.
   
 0.755
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.