Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004731annotation not available (106 aa)    
Predicted Functional Partners:
ENSCAPP00000011435
annotation not available
 
     0.931
RPL35
Ribosomal protein L35.
  
 0.923
ENSCAPP00000006313
annotation not available
    
 0.898
ENSCAPP00000016878
annotation not available
  
 
 0.867
RPS9
Ribosomal protein S9.
  
 
 0.864
RPL5
Ribosomal protein L5.
  
 
 0.861
RPS18
Ribosomal protein S18.
  
 
 0.860
ENSCAPP00000006028
annotation not available
  
 
 0.859
RPL23
Ribosomal protein L23.
  
   0.858
RPS5
Ribosomal protein S5.
  
 
 0.824
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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