STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB8ATP binding cassette subfamily B member 8. (716 aa)    
Predicted Functional Partners:
ENSCAPP00000012211
annotation not available
    
 0.974
ENSCAPP00000017181
annotation not available
  
 0.691
KCNJ1
Potassium inwardly rectifying channel subfamily J member 1.
    
 0.597
USP10
Ubiquitin specific peptidase 10.
    
  0.559
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
   
0.547
KCNJ4
Potassium inwardly rectifying channel subfamily J member 4.
   
  0.544
CALR3
Calreticulin 3.
   
 0.544
P4HB
Prolyl 4-hydroxylase subunit beta.
  
  0.536
KCNJ6
Potassium inwardly rectifying channel subfamily J member 6.
   
 0.531
KCNJ8
Potassium inwardly rectifying channel subfamily J member 8.
   
 0.531
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.