Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM184BFamily with sequence similarity 184 member B. (889 aa)    
Predicted Functional Partners:
NCAPG
non-SMC condensin I complex subunit G.
      
 0.937
FAM13A
Family with sequence similarity 13 member A.
      
 0.784
MED28
Mediator complex subunit 28.
      
 0.704
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 0.653
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.649
IBSP
Integrin binding sialoprotein.
    
 
 0.607
RANBP2
RAN binding protein 2.
    
 0.604
NWD2
NACHT and WD repeat domain containing 2.
    
 0.600
ENSCAPP00000014378
annotation not available
    
 
 0.576
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.575
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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