STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS4LDihydrouridine synthase 4 like. (237 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.824
PSMB1
Proteasome 20S subunit beta 1.
   
 
  0.741
ENSCAPP00000012825
annotation not available
 
    
 0.694
METTL1
Methyltransferase like 1.
  
 
 0.609
TRMT11
tRNA methyltransferase 11 homolog.
  
  
 0.607
TRMT61A
tRNA methyltransferase 61A.
   
  
 0.588
COG5
Component of oligomeric golgi complex 5.
   
  
 0.579
GPR22
G protein-coupled receptor 22.
      
 0.545
PUS1
Pseudouridine synthase 1.
  
 
 0.539
PARS2
prolyl-tRNA synthetase 2, mitochondrial.
  
 
 0.538
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.