ENSCAPP00000004740 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000004740

annotation not available (483 aa)

Predicted Functional Partners:

DCDC2

0.925

ENSCAPP00000001860

0.894

ENSCAPP00000000218

0.800

ENSCAPP00000013337

0.636

ENSCAPP00000013876

0.633

CMIP

0.617

ENSCAPP00000005158

0.576

ENSCAPP00000006723

0.572

DCDC2B

0.572

ENSCAPP00000002657

0.571

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CMIP	DCDC2	ENSCAPP00000006596	ENSCAPP00000014292	c-Maf inducing protein.	Doublecortin domain containing 2.	0.568
CMIP	DCDC2B	ENSCAPP00000006596	ENSCAPP00000007085	c-Maf inducing protein.	Doublecortin domain containing 2B.	0.526
CMIP	ENSCAPP00000004740	ENSCAPP00000006596	ENSCAPP00000004740	c-Maf inducing protein.	annotation not available	0.617
CMIP	ENSCAPP00000005158	ENSCAPP00000006596	ENSCAPP00000005158	c-Maf inducing protein.	annotation not available	0.537
CMIP	ENSCAPP00000006723	ENSCAPP00000006596	ENSCAPP00000006723	c-Maf inducing protein.	annotation not available	0.526
DCDC2	CMIP	ENSCAPP00000014292	ENSCAPP00000006596	Doublecortin domain containing 2.	c-Maf inducing protein.	0.568
DCDC2	ENSCAPP00000000218	ENSCAPP00000014292	ENSCAPP00000000218	Doublecortin domain containing 2.	annotation not available	0.687
DCDC2	ENSCAPP00000001860	ENSCAPP00000014292	ENSCAPP00000001860	Doublecortin domain containing 2.	annotation not available	0.889
DCDC2	ENSCAPP00000004740	ENSCAPP00000014292	ENSCAPP00000004740	Doublecortin domain containing 2.	annotation not available	0.925
DCDC2B	CMIP	ENSCAPP00000007085	ENSCAPP00000006596	Doublecortin domain containing 2B.	c-Maf inducing protein.	0.526
DCDC2B	ENSCAPP00000001860	ENSCAPP00000007085	ENSCAPP00000001860	Doublecortin domain containing 2B.	annotation not available	0.569
DCDC2B	ENSCAPP00000004740	ENSCAPP00000007085	ENSCAPP00000004740	Doublecortin domain containing 2B.	annotation not available	0.572
ENSCAPP00000000218	DCDC2	ENSCAPP00000000218	ENSCAPP00000014292	annotation not available	Doublecortin domain containing 2.	0.687
ENSCAPP00000000218	ENSCAPP00000001860	ENSCAPP00000000218	ENSCAPP00000001860	annotation not available	annotation not available	0.454
ENSCAPP00000000218	ENSCAPP00000004740	ENSCAPP00000000218	ENSCAPP00000004740	annotation not available	annotation not available	0.800
ENSCAPP00000001860	DCDC2	ENSCAPP00000001860	ENSCAPP00000014292	annotation not available	Doublecortin domain containing 2.	0.889
ENSCAPP00000001860	DCDC2B	ENSCAPP00000001860	ENSCAPP00000007085	annotation not available	Doublecortin domain containing 2B.	0.569
ENSCAPP00000001860	ENSCAPP00000000218	ENSCAPP00000001860	ENSCAPP00000000218	annotation not available	annotation not available	0.454
ENSCAPP00000001860	ENSCAPP00000004740	ENSCAPP00000001860	ENSCAPP00000004740	annotation not available	annotation not available	0.894
ENSCAPP00000001860	ENSCAPP00000006723	ENSCAPP00000001860	ENSCAPP00000006723	annotation not available	annotation not available	0.569