STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004740annotation not available (483 aa)    
Predicted Functional Partners:
ENSCAPP00000013876
annotation not available
    
 0.657
UBQLN4
Ubiquilin 4.
    
  0.630
ENSCAPP00000001860
annotation not available
    
 0.624
DCDC2
Doublecortin domain containing 2.
    
 
 0.610
AP2A1
Adaptor related protein complex 2 subunit alpha 1.
    
  0.597
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.567
SYT4
Synaptotagmin 4.
   
  0.561
ENSCAPP00000000218
annotation not available
      
 0.558
SYT11
Synaptotagmin 11.
   
  0.555
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
  0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.