STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CA5BCarbonic anhydrase 5B. (266 aa)    
Predicted Functional Partners:
P2RY1
Purinergic receptor P2Y1.
   
    0.649
RPF2
Ribosome production factor 2 homolog.
   
 
 0.619
ENSCAPP00000010238
annotation not available
     
  0.597
CYP24A1
Cytochrome P450 family 24 subfamily A member 1.
   
  
 0.586
ENSCAPP00000007639
annotation not available
      
 0.580
WDR43
WD repeat domain 43.
   
    0.569
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
  
 0.561
RPL5
Ribosomal protein L5.
   
 
 0.561
ENSCAPP00000003241
annotation not available
    
 
 0.560
RRP12
Ribosomal RNA processing 12 homolog.
   
    0.533
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.