GPX6 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

GPX6

Glutathione peroxidase 6. (189 aa)

Predicted Functional Partners:

GSR

0.977

PPARGC1A

0.947

ENSCAPP00000007249

0.945

GSTO2

0.939

ENSCAPP00000005641

0.929

MGST1

0.928

PRDX6

0.923

GSTP1

0.923

MGST3

0.922

ENSCAPP00000018441

0.917

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000005641	ENSCAPP00000007249	ENSCAPP00000005641	ENSCAPP00000007249	annotation not available	annotation not available	0.968
ENSCAPP00000005641	ENSCAPP00000018441	ENSCAPP00000005641	ENSCAPP00000018441	annotation not available	annotation not available	0.939
ENSCAPP00000005641	GPX6	ENSCAPP00000005641	ENSCAPP00000004751	annotation not available	Glutathione peroxidase 6.	0.929
ENSCAPP00000005641	GSR	ENSCAPP00000005641	ENSCAPP00000016404	annotation not available	Glutathione-disulfide reductase.	0.946
ENSCAPP00000005641	GSTO2	ENSCAPP00000005641	ENSCAPP00000007872	annotation not available	Glutathione S-transferase omega 2.	0.953
ENSCAPP00000005641	GSTP1	ENSCAPP00000005641	ENSCAPP00000011922	annotation not available	Glutathione S-transferase pi 1.	0.960
ENSCAPP00000005641	MGST1	ENSCAPP00000005641	ENSCAPP00000000940	annotation not available	Microsomal glutathione S-transferase 1.	0.931
ENSCAPP00000005641	MGST3	ENSCAPP00000005641	ENSCAPP00000012559	annotation not available	Microsomal glutathione S-transferase 3.	0.935
ENSCAPP00000005641	PRDX6	ENSCAPP00000005641	ENSCAPP00000007875	annotation not available	Peroxiredoxin 6.	0.954
ENSCAPP00000007249	ENSCAPP00000005641	ENSCAPP00000007249	ENSCAPP00000005641	annotation not available	annotation not available	0.968
ENSCAPP00000007249	ENSCAPP00000018441	ENSCAPP00000007249	ENSCAPP00000018441	annotation not available	annotation not available	0.945
ENSCAPP00000007249	GPX6	ENSCAPP00000007249	ENSCAPP00000004751	annotation not available	Glutathione peroxidase 6.	0.945
ENSCAPP00000007249	GSR	ENSCAPP00000007249	ENSCAPP00000016404	annotation not available	Glutathione-disulfide reductase.	0.919
ENSCAPP00000007249	GSTO2	ENSCAPP00000007249	ENSCAPP00000007872	annotation not available	Glutathione S-transferase omega 2.	0.946
ENSCAPP00000007249	GSTP1	ENSCAPP00000007249	ENSCAPP00000011922	annotation not available	Glutathione S-transferase pi 1.	0.940
ENSCAPP00000007249	MGST1	ENSCAPP00000007249	ENSCAPP00000000940	annotation not available	Microsomal glutathione S-transferase 1.	0.964
ENSCAPP00000007249	MGST3	ENSCAPP00000007249	ENSCAPP00000012559	annotation not available	Microsomal glutathione S-transferase 3.	0.929
ENSCAPP00000007249	PRDX6	ENSCAPP00000007249	ENSCAPP00000007875	annotation not available	Peroxiredoxin 6.	0.976
ENSCAPP00000018441	ENSCAPP00000005641	ENSCAPP00000018441	ENSCAPP00000005641	annotation not available	annotation not available	0.939
ENSCAPP00000018441	ENSCAPP00000007249	ENSCAPP00000018441	ENSCAPP00000007249	annotation not available	annotation not available	0.945