STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCP2Decapping mRNA 2. (390 aa)    
Predicted Functional Partners:
ENSCAPP00000000451
annotation not available
  
 0.999
ENSCAPP00000002117
annotation not available
   
 0.999
ENSCAPP00000009825
annotation not available
    
 0.999
DCP1B
Decapping mRNA 1B.
    
 0.998
DDX6
DEAD-box helicase 6.
   
 0.998
ENSCAPP00000013546
annotation not available
    
 0.995
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.992
LSM1
LSM1 homolog, mRNA degradation associated.
    
 0.981
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.976
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.962
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.