STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004766annotation not available (87 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.773
ENSCAPP00000006638
annotation not available
    
 
 0.660
ENSCAPP00000000974
annotation not available
    
 0.627
BARD1
BRCA1 associated RING domain 1.
    
 0.613
PLK3
Polo like kinase 3.
    
 0.584
PLK1
Polo like kinase 1.
    
 0.584
PPP2R2B
Protein phosphatase 2 regulatory subunit Bbeta.
    
 0.567
PPP2R2A
Protein phosphatase 2 regulatory subunit Balpha.
    
 0.567
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 
 0.554
CCDC125
Coiled-coil domain containing 125.
      
 0.536
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.