Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FHFumarate hydratase. (457 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase 2.
  
 0.996
ENSCAPP00000000571
annotation not available
 
 0.996
CS
Citrate synthase.
  
 0.993
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.992
ACO2
Aconitase 2.
  
 0.991
ENSCAPP00000006226
annotation not available
   
 0.987
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.987
MDH1
Malate dehydrogenase 1.
  
 0.978
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.964
ME1
Malic enzyme 1.
  
 
 0.960
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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