STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FHFumarate hydratase. (457 aa)    
Predicted Functional Partners:
ENSCAPP00000000571
annotation not available
 
 0.998
SUCLG1
succinate-CoA ligase alpha subunit.
  
 0.991
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.989
SUCLA2
succinate-CoA ligase ADP-forming beta subunit.
  
 0.982
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 
 0.978
MDH1
Malate dehydrogenase 1.
  
 0.977
ENSCAPP00000006264
annotation not available
  
 0.970
ENSCAPP00000014746
annotation not available
  
 0.970
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
  
 0.968
CS
Citrate synthase.
  
 0.967
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.