STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD4Coiled-coil-helix-coiled-coil-helix domain containing 4. (138 aa)    
Predicted Functional Partners:
GFER
Growth factor, augmenter of liver regeneration.
    
 0.988
ENSCAPP00000003716
annotation not available
   
 0.928
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.915
POP5
POP5 homolog, ribonuclease P/MRP subunit.
   
 
  0.895
TIMM8A
Translocase of inner mitochondrial membrane 8A.
   
 0.820
ENSCAPP00000011818
annotation not available
   
 
  0.819
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B.
   
 0.805
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
    
 0.750
ATP23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
    
 
 0.736
ENSCAPP00000000351
annotation not available
   
 0.693
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.