ENSCAPP00000004774 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000004774

annotation not available (69 aa)

Predicted Functional Partners:

CAMSAP3

0.908

AGO2

0.785

CAMSAP2

0.742

ENSCAPP00000011153

0.691

CNOT6

0.685

WDR63

0.633

CAMSAP1

0.614

ARHGEF12

0.567

KLC2

0.547

NME6

0.460

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO2	CNOT6	ENSCAPP00000013010	ENSCAPP00000002860	Argonaute RISC catalytic component 2.	CCR4-NOT transcription complex subunit 6.	0.800
AGO2	ENSCAPP00000004774	ENSCAPP00000013010	ENSCAPP00000004774	Argonaute RISC catalytic component 2.	annotation not available	0.785
ARHGEF12	CNOT6	ENSCAPP00000002577	ENSCAPP00000002860	Rho guanine nucleotide exchange factor 12.	CCR4-NOT transcription complex subunit 6.	0.410
ARHGEF12	ENSCAPP00000004774	ENSCAPP00000002577	ENSCAPP00000004774	Rho guanine nucleotide exchange factor 12.	annotation not available	0.567
CAMSAP1	CAMSAP2	ENSCAPP00000010458	ENSCAPP00000013485	Calmodulin regulated spectrin associated protein 1.	Calmodulin regulated spectrin associated protein family member 2.	0.425
CAMSAP1	ENSCAPP00000004774	ENSCAPP00000010458	ENSCAPP00000004774	Calmodulin regulated spectrin associated protein 1.	annotation not available	0.614
CAMSAP2	CAMSAP1	ENSCAPP00000013485	ENSCAPP00000010458	Calmodulin regulated spectrin associated protein family member 2.	Calmodulin regulated spectrin associated protein 1.	0.425
CAMSAP2	CAMSAP3	ENSCAPP00000013485	ENSCAPP00000017153	Calmodulin regulated spectrin associated protein family member 2.	Calmodulin regulated spectrin associated protein family member 3.	0.893
CAMSAP2	ENSCAPP00000004774	ENSCAPP00000013485	ENSCAPP00000004774	Calmodulin regulated spectrin associated protein family member 2.	annotation not available	0.742
CAMSAP3	CAMSAP2	ENSCAPP00000017153	ENSCAPP00000013485	Calmodulin regulated spectrin associated protein family member 3.	Calmodulin regulated spectrin associated protein family member 2.	0.893
CAMSAP3	ENSCAPP00000004774	ENSCAPP00000017153	ENSCAPP00000004774	Calmodulin regulated spectrin associated protein family member 3.	annotation not available	0.908
CNOT6	AGO2	ENSCAPP00000002860	ENSCAPP00000013010	CCR4-NOT transcription complex subunit 6.	Argonaute RISC catalytic component 2.	0.800
CNOT6	ARHGEF12	ENSCAPP00000002860	ENSCAPP00000002577	CCR4-NOT transcription complex subunit 6.	Rho guanine nucleotide exchange factor 12.	0.410
CNOT6	ENSCAPP00000004774	ENSCAPP00000002860	ENSCAPP00000004774	CCR4-NOT transcription complex subunit 6.	annotation not available	0.685
ENSCAPP00000004774	AGO2	ENSCAPP00000004774	ENSCAPP00000013010	annotation not available	Argonaute RISC catalytic component 2.	0.785
ENSCAPP00000004774	ARHGEF12	ENSCAPP00000004774	ENSCAPP00000002577	annotation not available	Rho guanine nucleotide exchange factor 12.	0.567
ENSCAPP00000004774	CAMSAP1	ENSCAPP00000004774	ENSCAPP00000010458	annotation not available	Calmodulin regulated spectrin associated protein 1.	0.614
ENSCAPP00000004774	CAMSAP2	ENSCAPP00000004774	ENSCAPP00000013485	annotation not available	Calmodulin regulated spectrin associated protein family member 2.	0.742
ENSCAPP00000004774	CAMSAP3	ENSCAPP00000004774	ENSCAPP00000017153	annotation not available	Calmodulin regulated spectrin associated protein family member 3.	0.908
ENSCAPP00000004774	CNOT6	ENSCAPP00000004774	ENSCAPP00000002860	annotation not available	CCR4-NOT transcription complex subunit 6.	0.685