Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX50DExD-box helicase 50. (617 aa)    
Predicted Functional Partners:
DDX21
DExD-box helicase 21.
   
   0.975
ENSCAPP00000015731
annotation not available
  
 0.924
ENSCAPP00000010582
annotation not available
   
 0.920
DHX9
DExH-box helicase 9.
  
 0.920
ENSCAPP00000005428
annotation not available
   
 0.898
ENSCAPP00000011089
annotation not available
   
 0.898
LARP7
La ribonucleoprotein 7, transcriptional regulator.
   
 0.889
WDR12
WD repeat domain 12.
   
 0.879
GTPBP4
GTP binding protein 4.
   
 0.878
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.873
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.