STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXPH1Neurexophilin 1. (270 aa)    
Predicted Functional Partners:
ENSCAPP00000009286
annotation not available
   
 
 0.875
NRXN3
Neurexin 3.
   
 
 0.684
ENSCAPP00000000546
annotation not available
   
 
 0.683
NRXN2
Neurexin 2.
   
 
 0.676
ENSCAPP00000015861
annotation not available
    
 
 0.622
LRRTM3
Leucine rich repeat transmembrane neuronal 3.
   
  
 0.579
ENSCAPP00000014343
annotation not available
  
  
 0.551
ARHGAP26
Rho GTPase activating protein 26.
      
 0.539
MIEF1
Mitochondrial elongation factor 1.
  
   
 0.486
ENSCAPP00000012370
annotation not available
  
     0.485
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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