STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM8Transient receptor potential cation channel subfamily M member 8. (1089 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
  0.866
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
  0.857
ENSCAPP00000000802
annotation not available
    
  0.852
SCN10A
Sodium voltage-gated channel alpha subunit 10.
     
 0.723
SCN11A
Sodium voltage-gated channel alpha subunit 11.
     
 0.689
SCNN1G
Sodium channel epithelial 1 gamma subunit.
     
 0.686
ENSCAPP00000000401
annotation not available
     
 0.680
TRPV3
Transient receptor potential cation channel subfamily V member 3.
     
 0.668
TRPV4
Transient receptor potential cation channel subfamily V member 4.
     
 0.668
TRPV1
Transient receptor potential cation channel subfamily V member 1.
     
 0.668
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.