STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIP5K1CPhosphatidylinositol-4-phosphate 5-kinase type 1 gamma. (722 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
    
 0.988
TLN2
Talin 2.
    
 0.944
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
  
 
 
0.907
PI4KA
Phosphatidylinositol 4-kinase alpha.
   
 0.880
PI4KB
Phosphatidylinositol 4-kinase beta.
   
 0.861
PIK3CD
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
     
 0.852
PLCE1
Phospholipase C epsilon 1.
    
 0.843
PLCD4
Phospholipase C delta 4.
    
 0.843
PLCD1
Phospholipase C delta 1.
    
 0.843
ENSCAPP00000008484
annotation not available
    
 0.843
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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