ZNF652 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ZNF652

Zinc finger protein 652. (550 aa)

Predicted Functional Partners:

MYC

0.865

ENSCAPP00000015240

0.769

MAX

0.747

PCYT1A

0.729

PCYT1B

0.729

PCYT2

0.722

CHAT

0.708

MAFG

0.655

ENSCAPP00000016139

0.590

MYSM1

0.556

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHAT	ENSCAPP00000016139	ENSCAPP00000014628	ENSCAPP00000016139	Choline O-acetyltransferase.	annotation not available	0.917
CHAT	ZNF652	ENSCAPP00000014628	ENSCAPP00000004786	Choline O-acetyltransferase.	Zinc finger protein 652.	0.708
ENSCAPP00000015240	MYC	ENSCAPP00000015240	ENSCAPP00000005163	annotation not available	MYC proto-oncogene, bHLH transcription factor.	0.976
ENSCAPP00000015240	MYSM1	ENSCAPP00000015240	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.556
ENSCAPP00000015240	ZNF652	ENSCAPP00000015240	ENSCAPP00000004786	annotation not available	Zinc finger protein 652.	0.769
ENSCAPP00000016139	CHAT	ENSCAPP00000016139	ENSCAPP00000014628	annotation not available	Choline O-acetyltransferase.	0.917
ENSCAPP00000016139	PCYT1A	ENSCAPP00000016139	ENSCAPP00000000529	annotation not available	Phosphate cytidylyltransferase 1, choline, alpha.	0.961
ENSCAPP00000016139	PCYT1B	ENSCAPP00000016139	ENSCAPP00000002466	annotation not available	Phosphate cytidylyltransferase 1, choline, beta.	0.963
ENSCAPP00000016139	PCYT2	ENSCAPP00000016139	ENSCAPP00000007659	annotation not available	Phosphate cytidylyltransferase 2, ethanolamine.	0.959
ENSCAPP00000016139	ZNF652	ENSCAPP00000016139	ENSCAPP00000004786	annotation not available	Zinc finger protein 652.	0.590
MAFG	PCYT2	ENSCAPP00000008868	ENSCAPP00000007659	MAF bZIP transcription factor G.	Phosphate cytidylyltransferase 2, ethanolamine.	0.571
MAFG	ZNF652	ENSCAPP00000008868	ENSCAPP00000004786	MAF bZIP transcription factor G.	Zinc finger protein 652.	0.655
MAX	MYC	ENSCAPP00000014165	ENSCAPP00000005163	MYC associated factor X.	MYC proto-oncogene, bHLH transcription factor.	0.997
MAX	ZNF652	ENSCAPP00000014165	ENSCAPP00000004786	MYC associated factor X.	Zinc finger protein 652.	0.747
MYC	ENSCAPP00000015240	ENSCAPP00000005163	ENSCAPP00000015240	MYC proto-oncogene, bHLH transcription factor.	annotation not available	0.976
MYC	MAX	ENSCAPP00000005163	ENSCAPP00000014165	MYC proto-oncogene, bHLH transcription factor.	MYC associated factor X.	0.997
MYC	ZNF652	ENSCAPP00000005163	ENSCAPP00000004786	MYC proto-oncogene, bHLH transcription factor.	Zinc finger protein 652.	0.865
MYSM1	ENSCAPP00000015240	ENSCAPP00000004064	ENSCAPP00000015240	Myb like, SWIRM and MPN domains 1.	annotation not available	0.556
MYSM1	ZNF652	ENSCAPP00000004064	ENSCAPP00000004786	Myb like, SWIRM and MPN domains 1.	Zinc finger protein 652.	0.556
PCYT1A	ENSCAPP00000016139	ENSCAPP00000000529	ENSCAPP00000016139	Phosphate cytidylyltransferase 1, choline, alpha.	annotation not available	0.961