Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEPRONucleolus and neural progenitor protein. (507 aa)    
Predicted Functional Partners:
ENSCAPP00000004525
annotation not available
    
 0.994
POP4
POP4 homolog, ribonuclease P/MRP subunit.
    
 0.993
RPP30
Ribonuclease P/MRP subunit p30.
    
 0.992
RPP25L
Ribonuclease P/MRP subunit p25 like.
    
 0.989
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.977
POP5
POP5 homolog, ribonuclease P/MRP subunit.
    
  0.975
ENSCAPP00000001916
annotation not available
    
  0.954
SNU13
Small nuclear ribonucleoprotein 13.
   
 0.924
ENSCAPP00000016779
annotation not available
    
   0.842
RPP40
Ribonuclease P/MRP subunit p40.
    
  0.824
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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