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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEPRONucleolus and neural progenitor protein. (507 aa)    
Predicted Functional Partners:
POP4
POP4 homolog, ribonuclease P/MRP subunit.
    
   0.748
RPP30
Ribonuclease P/MRP subunit p30.
    
   0.715
RPP25L
Ribonuclease P/MRP subunit p25 like.
    
   0.588
EIF2S2
Eukaryotic translation initiation factor 2 subunit beta.
      
 0.559
SNU13
Small nuclear ribonucleoprotein 13.
   
   0.549
ENSCAPP00000001916
annotation not available
    
   0.517
ARHGAP42
Rho GTPase activating protein 42.
      
 0.517
ENSCAPP00000004525
annotation not available
    
   0.478
ENSCAPP00000012056
annotation not available
  
 
   0.440
UVSSA
UV stimulated scaffold protein A.
      
 0.429
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.