STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDI1GDP dissociation inhibitor 1. (446 aa)    
Predicted Functional Partners:
ENSCAPP00000002664
annotation not available
    
 0.986
RAB9A
RAB9A, member RAS oncogene family.
    
 0.951
RAB1A
RAB1A, member RAS oncogene family.
   
 0.941
RAB1B
RAB1B, member RAS oncogene family.
   
 0.938
RAB6A
RAB6A, member RAS oncogene family.
    
 0.923
RAB6B
RAB6B, member RAS oncogene family.
    
 0.923
RAB7B
RAB7B, member RAS oncogene family.
    
 0.907
ENSCAPP00000005436
annotation not available
   
 0.904
ENSCAPP00000006409
annotation not available
   
 0.904
RAB17
RAB17, member RAS oncogene family.
   
 0.893
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.