NAALADL1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAALADL1

N-acetylated alpha-linked acidic dipeptidase like 1. (730 aa)

Predicted Functional Partners:

GAK

0.979

EPOR

0.793

IL7R

0.636

ASPA

0.612

ENSCAPP00000016502

0.604

SORL1

0.594

ENSCAPP00000000779

0.568

HFE

0.568

ENSCAPP00000003581

0.568

FCGRT

0.568

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASPA	ENSCAPP00000016502	ENSCAPP00000006341	ENSCAPP00000016502	Aspartoacylase.	annotation not available	0.944
ASPA	GAK	ENSCAPP00000006341	ENSCAPP00000012103	Aspartoacylase.	Cyclin G associated kinase.	0.530
ASPA	NAALADL1	ENSCAPP00000006341	ENSCAPP00000004803	Aspartoacylase.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.612
ENSCAPP00000000779	ENSCAPP00000003581	ENSCAPP00000000779	ENSCAPP00000003581	annotation not available	annotation not available	0.558
ENSCAPP00000000779	NAALADL1	ENSCAPP00000000779	ENSCAPP00000004803	annotation not available	N-acetylated alpha-linked acidic dipeptidase like 1.	0.568
ENSCAPP00000003581	ENSCAPP00000000779	ENSCAPP00000003581	ENSCAPP00000000779	annotation not available	annotation not available	0.558
ENSCAPP00000003581	NAALADL1	ENSCAPP00000003581	ENSCAPP00000004803	annotation not available	N-acetylated alpha-linked acidic dipeptidase like 1.	0.568
ENSCAPP00000016502	ASPA	ENSCAPP00000016502	ENSCAPP00000006341	annotation not available	Aspartoacylase.	0.944
ENSCAPP00000016502	NAALADL1	ENSCAPP00000016502	ENSCAPP00000004803	annotation not available	N-acetylated alpha-linked acidic dipeptidase like 1.	0.604
EPOR	IL7R	ENSCAPP00000008397	ENSCAPP00000009677	Erythropoietin receptor.	Interleukin 7 receptor.	0.787
EPOR	NAALADL1	ENSCAPP00000008397	ENSCAPP00000004803	Erythropoietin receptor.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.793
FCGRT	HFE	ENSCAPP00000004016	ENSCAPP00000002616	Fc fragment of IgG receptor and transporter.	Homeostatic iron regulator.	0.835
FCGRT	NAALADL1	ENSCAPP00000004016	ENSCAPP00000004803	Fc fragment of IgG receptor and transporter.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.568
GAK	ASPA	ENSCAPP00000012103	ENSCAPP00000006341	Cyclin G associated kinase.	Aspartoacylase.	0.530
GAK	NAALADL1	ENSCAPP00000012103	ENSCAPP00000004803	Cyclin G associated kinase.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.979
GAK	SORL1	ENSCAPP00000012103	ENSCAPP00000008527	Cyclin G associated kinase.	Sortilin related receptor 1.	0.984
HFE	FCGRT	ENSCAPP00000002616	ENSCAPP00000004016	Homeostatic iron regulator.	Fc fragment of IgG receptor and transporter.	0.835
HFE	NAALADL1	ENSCAPP00000002616	ENSCAPP00000004803	Homeostatic iron regulator.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.568
IL7R	EPOR	ENSCAPP00000009677	ENSCAPP00000008397	Interleukin 7 receptor.	Erythropoietin receptor.	0.787
IL7R	NAALADL1	ENSCAPP00000009677	ENSCAPP00000004803	Interleukin 7 receptor.	N-acetylated alpha-linked acidic dipeptidase like 1.	0.636