Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT6Synaptotagmin 6. (414 aa)    
Predicted Functional Partners:
SYT10
Synaptotagmin 10.
    
   0.959
SYT3
Synaptotagmin 3.
    
   0.958
MADD
MAP kinase activating death domain.
    
   0.931
ENSCAPP00000006357
annotation not available
      
 0.817
DRD2
Dopamine receptor D2.
   
 
 0.716
STON2
Stonin 2.
    
 0.699
SYT9
Synaptotagmin 9.
   
  0.692
SNAP25
Synaptosome associated protein 25.
    
 0.586
LAMP5
Lysosomal associated membrane protein family member 5.
   
  
 0.578
ENSCAPP00000011974
annotation not available
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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