STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT6Synaptotagmin 6. (414 aa)    
Predicted Functional Partners:
SYT10
Synaptotagmin 10.
  
 
  
0.697
STON2
Stonin 2.
    
 0.684
ITSN2
Intersectin 2.
     
 0.674
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.652
ENSCAPP00000006357
annotation not available
      
 0.612
SNAP47
Synaptosome associated protein 47.
    
 0.576
SNAP25
Synaptosome associated protein 25.
    
 0.573
SYT3
Synaptotagmin 3.
    
  
0.564
SNAP23
Synaptosome associated protein 23.
    
 0.558
HAUS2
HAUS augmin like complex subunit 2.
    
 0.558
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.