STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004807annotation not available (329 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
   
 0.994
TNF
Tumor necrosis factor.
   
 0.981
TNIP1
TNFAIP3 interacting protein 1.
   
 0.979
TAX1BP1
Tax1 binding protein 1.
    
 0.966
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.961
ENSCAPP00000015762
annotation not available
    
 0.940
TRAF2
TNF receptor associated factor 2.
   
 0.919
TRAF1
TNF receptor associated factor 1.
   
 0.911
ENSCAPP00000012533
annotation not available
   
 0.896
ENSCAPP00000000492
annotation not available
    
  0.876
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.