Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4ASemaphorin 4A. (710 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
 0.993
ENSCAPP00000004294
annotation not available
    
 0.963
PLXNB1
Plexin B1.
    
 0.954
PLXNB3
Plexin B3.
    
 0.954
SEMA4D
Semaphorin 4D.
    
 0.887
SEMA4G
Semaphorin 4G.
    
 0.885
SEMA4C
Semaphorin 4C.
    
 0.885
SEMA4B
Semaphorin 4B.
     
  0.841
SEMA4F
Ssemaphorin 4F.
    
 0.767
ENSCAPP00000015944
annotation not available
    
 0.761
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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