close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPME1Protein phosphatase methylesterase 1. (295 aa)    
Predicted Functional Partners:
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
   
 0.968
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
   
 0.968
ENSCAPP00000005471
annotation not available
    
 0.932
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
 0.932
ENSCAPP00000013859
annotation not available
    
 0.932
MRPS12
Mitochondrial ribosomal protein S12.
     
 0.922
MRPS14
Mitochondrial ribosomal protein S14.
     
 0.921
ENSCAPP00000013732
annotation not available
    
 0.920
MRPS16
Mitochondrial ribosomal protein S16.
    
  0.919
MRPS6
Mitochondrial ribosomal protein S6.
    
 0.914
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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