STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF6Serine and arginine rich splicing factor 6. (199 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
    
 0.939
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.936
TRA2B
Transformer 2 beta homolog.
   
 0.935
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.921
ENSCAPP00000017855
annotation not available
    
 0.915
RBM25
RNA binding motif protein 25.
   
 0.903
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.891
ENSCAPP00000015332
annotation not available
   
 0.888
ENSCAPP00000004661
annotation not available
   
 0.881
NXF1
Nuclear RNA export factor 1.
   
 0.875
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.