STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHTOPChromatin target of PRMT1. (224 aa)    
Predicted Functional Partners:
DDX39B
DExD-box helicase 39B.
   
 0.992
ENSCAPP00000016641
annotation not available
   
 0.979
ENSCAPP00000009699
annotation not available
   
 0.973
THOC1
THO complex 1.
    
 0.969
ENSCAPP00000009016
annotation not available
   
 0.968
THOC7
THO complex 7.
    
 0.961
DDX39A
DExD-box helicase 39A.
   
 0.944
ENSCAPP00000014327
annotation not available
   
 0.936
ENSCAPP00000008334
annotation not available
     
 0.934
ENSCAPP00000005870
annotation not available
     
 0.933
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.