Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAI1Retinoic acid induced 1. (1512 aa)    
Predicted Functional Partners:
HMG20A
High mobility group 20A.
   
 
 0.890
AMACR
alpha-methylacyl-CoA racemase.
     
 0.843
ENSCAPP00000015921
annotation not available
    
 0.822
ENSCAPP00000009531
annotation not available
    
 
 0.804
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.799
KDM6B
Lysine demethylase 6B.
   
 0.786
ENSCAPP00000002351
annotation not available
    
 0.768
KIF3A
Kinesin family member 3A.
    
 0.724
DOT1L
DOT1 like histone lysine methyltransferase.
  
 0.705
IFT81
Intraflagellar transport 81.
    
 
 0.705
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.