STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD4ASterile alpha motif domain containing 4A. (717 aa)    
Predicted Functional Partners:
ENSCAPP00000009903
annotation not available
    
   0.508
ENSCAPP00000017737
annotation not available
    
   0.508
NANOS3
Nanos C2HC-type zinc finger 3.
    
 
 0.444
ENSCAPP00000016992
annotation not available
    
 
 0.444
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
    
 
 0.419
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 
 0.415
SSX2IP
SSX family member 2 interacting protein.
   
   0.407
STAU1
Staufen double-stranded RNA binding protein 1.
      
 0.407
CCDC80
Coiled-coil domain containing 80.
  
 
 
 0.404
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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