Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRAT1BRCA1 associated ATM activator 1. (736 aa)    
Predicted Functional Partners:
ENSCAPP00000013163
annotation not available
    
 
 0.911
INTS9
Integrator complex subunit 9.
    
 
 0.900
INTS11
Integrator complex subunit 11.
    
   0.878
WDR73
WD repeat domain 73.
    
 
 0.791
INTS4
Integrator complex subunit 4.
    
   0.776
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.643
BRAP
BRCA1 associated protein.
      
 0.575
GNPAT
Glyceronephosphate O-acyltransferase.
      
 0.571
MYB
MYB proto-oncogene, transcription factor.
      
 0.569
CANT1
Calcium activated nucleotidase 1.
      
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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