STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABRAXAS2Abraxas 2, BRISC complex subunit. (399 aa)    
Predicted Functional Partners:
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.998
ENSCAPP00000016428
annotation not available
    
 0.998
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.997
SHMT1
Serine hydroxymethyltransferase 1.
    
 0.971
MPND
MPN domain containing.
    
 0.912
TP53
Tumor protein p53.
    
  0.898
ENSCAPP00000013163
annotation not available
    
 0.885
USP7
Ubiquitin specific peptidase 7.
    
 
 0.853
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
  0.852
ENSCAPP00000001540
annotation not available
    
   0.822
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.