STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABRAXAS2Abraxas 2, BRISC complex subunit. (399 aa)    
Predicted Functional Partners:
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.997
ENSCAPP00000016428
annotation not available
    
 0.997
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.994
SHMT1
Serine hydroxymethyltransferase 1.
    
 0.958
ENSCAPP00000013163
annotation not available
    
 0.842
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
     
0.573
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.562
ENSCAPP00000009178
annotation not available
   
 0.556
BARD1
BRCA1 associated RING domain 1.
    
 0.552
KDM6B
Lysine demethylase 6B.
    
 0.552
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.